I am working on improving setup script [1]. I encountered a few bugs after starting to work on it. I fixed a few of them. Now I am facing another issue. After modifying/setting values and applaying them. The setup doesn't retain those options. It shows basic configuration file when I try to display them using display option. It will be great if someone can help me fix it. You can checkout my branch from Github [2].

[1] https://github.com/phpmyadmin/phpmyadmin/issues/12844

[2] https://github.com/Achilles-96/phpmyadmin/tree/Setup-Improvements

Regards,

Raghuram